- 27 Oct, 2021 3 commits
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Lukas Riedel authored
Fix issues from Python package updates See merge request !224
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Lukas Riedel authored
* base64.decodestring() was previously deprecated and recently removed. * PyYAML 6 now requires a `loader` argument when loading. * numpy.dtype only understands lowercase type strings now. * Update CHANGELOG.md
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Lukas Riedel authored
Run pipelines on any branch See merge request !221
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- 12 Oct, 2020 2 commits
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Lukas Riedel authored
Resolve "Flux reconstruction on FV does not work with alpha volumes" Closes #206 See merge request !219
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This only serves to make the current flux reconstruction implementation compatible with finite volume operators which implement an `alpha_volume()` method.
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- 09 Oct, 2020 2 commits
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Lukas Riedel authored
Make PVDReader initialize VTKReaders lazily See merge request !216
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Lukas Riedel authored
PVDReader now only stores the paths to VTK files and initializes VTKReader instances when they are explicitly accessed. Users can choose if missing VTK files should result in exceptions or warnings. Additionally: * Add time as argument for VTKReader. * Make PVDReader raise more exceptions. * Switch to FileNotFoundError exceptions where suitable. * Update tests to check PVDReader initialization. * Update docs and docstrings.
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- 05 Oct, 2020 1 commit
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Lukas Riedel authored
This fixes the issue that pipelines are not run for branches with a single commit.
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- 27 Aug, 2020 2 commits
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Santiago Ospina De Los Ríos authored
Resolve "Update C++ standard requirement" Closes #198 See merge request !218
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* Explicitly sets the C++ standard version for the compiled DORiE libraries and document the standard we use.
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- 24 Aug, 2020 2 commits
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Santiago Ospina De Los Ríos authored
Add JOSS publication Closes #199 See merge request !198
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Include the binary random fields and GMSH files to ensure that the same simulations can be run on any system.
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- 20 Aug, 2020 2 commits
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Santiago Ospina De Los Ríos authored
Improve GitLab CI pipeline See merge request !214
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This is achieved by moving the dune-env into the project build directory which is propagated as artifact.
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- 11 Aug, 2020 5 commits
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Lukas Riedel authored
Resolve "Use more recent version of Ubuntu in Docker" Closes #178 See merge request !189
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This updates the Docker base image and testing system to the most recent Ubuntu with LTS. Accordingly, the software requirements have been updated. * Update Docker base image to Ubuntu `focal`. * Switch to Ubuntu version based tagging scheme of base image. * Update CMake configuration to CMake v3.16. * Use spdlog as external dependency and remove Git Submodule. * Update installation instructions in README.md * Make code compliant to recent Python and compiler versions.
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Santiago Ospina De Los Ríos authored
Fix installation stage See merge request !207
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Santiago Ospina De Los Ríos authored
This will install the executables of DORiE into the target install directory.
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Santiago Ospina De Los Ríos authored
Resolve "setting of [grid]extensions seems to not work with gmsh grids" Closes #193 See merge request !215
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- 05 Aug, 2020 1 commit
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Lukas Riedel authored
* Stop passing grid extensions into model config sections. * Clean up FlowSource, removing the storage of grid extensions. * Clarify usage of grid related keys in config file. * Update CHANGELOG.md.
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- 21 Jul, 2020 2 commits
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Santiago Ospina De Los Ríos authored
Resolve "Use more elaborate "rules" in GitLab CI/CD configuration" Closes #203 See merge request !213
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* Switch to 'rules' for specifying when certain CI jobs are executed. * Execute 'setup' and 'prep' jobs when respective Dockerfiles change.
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- 20 Jul, 2020 2 commits
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Santiago Ospina De Los Ríos authored
Add .clang-format file and instructions Closes #180 See merge request !203
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Use 'Mozilla' style with slight modifications: * Break before binary operators, except assignment operators. * Usually break before braces ('Allman' style).
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- 15 Jul, 2020 2 commits
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Lukas Riedel authored
Fix warning about unused HD5 status file valriable on release mode See merge request !206
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H5File will now log warnings if non-critical assertions fail.
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- 08 Jul, 2020 4 commits
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Lukas Riedel authored
Fix "Available Models" table in user docs See merge request !211
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Lukas Riedel authored
This reverts commit 358ed887.
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Lukas Riedel authored
Fix Python encoding error in Docker image See merge request !210
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Lukas Riedel authored
Upgrading the "locale" package invalidates previous locale definitions.
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- 07 Jul, 2020 2 commits
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Santiago Ospina De Los Ríos authored
Advertise features in README and docs See merge request !209
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Santiago Ospina De Los Ríos authored
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- 06 Jul, 2020 2 commits
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Lukas Riedel authored
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Lukas Riedel authored
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- 03 Jul, 2020 4 commits
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Santiago Ospina De Los Ríos authored
add extended miller scaling adapter See merge request !122
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* Port test to Google Test. * Add meta-ini config file to build grid in test fixture. * Add Python script for creating scaling datasets before testing. * Add test case for non-cubic dataset.
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Santiago Ospina De Los Ríos authored
Resolve "Simplify cloning DUNE modules and executing dunecontrol script" Closes #197 See merge request !205
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* Update Dockerfiles to clone and build DUNE modules using the `clone_dune` script and `build.opts` file. * Set compiler environment variables in base image (only).
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- 01 Jul, 2020 2 commits
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Santiago Ospina De Los Ríos authored
Resolve "Use BCGS_AMG_SSOR solver for finite volume methods" Closes #169 See merge request !204
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This selects the BCGS_AMG_SSOR linear solver backend for FV computations in both the Richards and the Transport model.
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